Cell · 2017

A Next Generation Connectivity Map: L1000 Platform and the First 1,000,000 Profiles

Subramanian A, Narayan R, Corsello SM, Peck DD, Natoli TE, Lu X, Gould J, Davis JF, Tubelli AA, Asiedu JK, Lahr DL, Hirschman JE, Liu Z, Donahue M, Julian B, Khan M, Wadden D, Smith IC, Lam D, Liberzon A, Toder C, Bagul M, Orzechowski M, Enache OM, Piccioni F, Johnson SA, Lyons NJ, Berger AH, Shamji AF, Brooks AN, Vrcic A, Flynn C, Rosains J, Takeda DY, Hu R, Davison D, Lamb J, Ardlie K, Hogstrom L, Greenside P, Gray NS, Clemons PA, Silver S, Wu X, Zhao WN, Read-Button W, Wu X, Haggarty SJ, Ronco LV, Boehm JS, Schreiber SL, Doench JG, Bittker JA, Root DE, Wong B, Golub TR.

Show affiliations
  • Subramanian ABroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Narayan RBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Corsello SMBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Harvard Medical School, Boston, MA 02115, USA.
  • Peck DDBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Natoli TEBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Lu XBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Gould JBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Davis JFBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Tubelli AABroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Asiedu JKBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Lahr DLBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Hirschman JEBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Liu ZBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Donahue MBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Julian BBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Khan MBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Wadden DBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Smith ICBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Lam DBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Liberzon ABroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Toder CBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Bagul MBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Orzechowski MBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Enache OMBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Piccioni FBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Johnson SABroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Lyons NJBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Berger AHBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Harvard Medical School, Boston, MA 02115, USA.
  • Shamji AFBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Brooks ANBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Harvard Medical School, Boston, MA 02115, USA.
  • Vrcic ABroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Flynn CBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Rosains JBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Takeda DYBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Harvard Medical School, Boston, MA 02115, USA.
  • Hu RBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Davison DBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Lamb JBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Ardlie KBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Hogstrom LBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Greenside PBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Gray NSBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Harvard Medical School, Boston, MA 02115, USA; Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
  • Clemons PABroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Silver SBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Wu XBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Zhao WNBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Harvard Medical School, Boston, MA 02115, USA; Department of Neurology, Massachusetts General Hospital, Boston, MA 02114, USA.
  • Read-Button WBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Wu XBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Haggarty SJBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Harvard Medical School, Boston, MA 02115, USA; Department of Neurology, Massachusetts General Hospital, Boston, MA 02114, USA.
  • Ronco LVBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Boehm JSBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Schreiber SLBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA.
  • Doench JGBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Bittker JABroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Root DEBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Wong BBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
  • Golub TRBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Harvard Medical School, Boston, MA 02115, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA; Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA. Electronic address: golub@broadinstitute.org.
47 read11 want to readRigor 2.7Novelty 2.6Impact 3.1Reprod. 3.5

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Discussion

Share your thoughts above to start a thread. Constructive feedback only — reply to and like others’ posts.

0

Omar Sato

Rigor 1/5Novelty 5/5Impact 5/5Reprod. 5/5

Interesting idea, small sample.

0

Pablo Cohen

Rigor 1/5Novelty 4/5Impact 3/5Reprod. 5/5

Great figures and clear story.

0

Hugo Garcia

Rigor 4/5Novelty 5/5Impact 1/5Reprod. 2/5

Great figures and clear story.

0

Ravi Sato

Rigor 2/5Novelty 5/5Impact 1/5Reprod. 4/5

Nice but incremental.

0

Tariq Silva

Rigor 4/5Novelty 4/5Impact 2/5Reprod. 3/5

Replication is unclear to me.

0

Nadia Nguyen

Rigor 2/5Novelty 5/5Impact 2/5Reprod. 3/5

Nice but incremental.

0

Nadia Park

Rigor 1/5Novelty 2/5Impact 4/5Reprod. 5/5

Replication is unclear to me.

0

Alex Mueller

Rigor 4/5Novelty 2/5Impact 3/5Reprod. 5/5

Solid methods, convincing results.

0

Eva Garcia

Rigor 1/5Novelty 1/5Impact 5/5Reprod. 1/5

Interesting idea, small sample.

0

Hugo Patel

Rigor 1/5Novelty 1/5Impact 4/5Reprod. 2/5

Great figures and clear story.

0

Ines Lee

Rigor 1/5Novelty 3/5Impact 5/5Reprod. 5/5

Replication is unclear to me.