Immunity · 2018

The Immune Landscape of Cancer

Thorsson V, Gibbs DL, Brown SD, Wolf D, Bortone DS, Ou Yang TH, Porta-Pardo E, Gao GF, Plaisier CL, Eddy JA, Ziv E, Culhane AC, Paull EO, Sivakumar IKA, Gentles AJ, Malhotra R, Farshidfar F, Colaprico A, Parker JS, Mose LE, Vo NS, Liu J, Liu Y, Rader J, Dhankani V, Reynolds SM, Bowlby R, Califano A, Cherniack AD, Anastassiou D, Bedognetti D, Mokrab Y, Newman AM, Rao A, Chen K, Krasnitz A, Hu H, Malta TM, Noushmehr H, Pedamallu CS, Bullman S, Ojesina AI, Lamb A, Zhou W, Shen H, Choueiri TK, Weinstein JN, Guinney J, Saltz J, Holt RA, Rabkin CS, Cancer Genome Atlas Research Network, Lazar AJ, Serody JS, Demicco EG, Disis ML, Vincent BG, Shmulevich I.

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Thorsson V — Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA. Electronic address: vesteinn.thorsson@systemsbiology.org.
Gibbs DL — Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA.
Brown SD — Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC V5Z 4S6, Canada.
Wolf D — University of California, San Francisco, Box 0808, 2340 Sutter Street, S433, San Francisco, CA 94115, USA.
Bortone DS — Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA.
Ou Yang TH — Department of Systems Biology and Department of Electrical Engineering, Columbia University, New York, NY 10027, USA.
Porta-Pardo E — Barcelona Supercomputing Centre, c/Jordi Girona, 29, 08034 Barcelona, Spain; SBP Medical Discovery Institute, La Jolla, CA 92037, USA.
Gao GF — The Eli and Edythe L. Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, MA 02142, USA.
Plaisier CL — Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA; School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ 85281, USA.
Eddy JA — Sage Bionetworks, 2901 Third Ave, Suite 330, Seattle, WA 98121, USA.
Ziv E — Department of Medicine, Institute for Human Genetics, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, 1450 3rd St, San Francisco, CA 94143, USA.
Culhane AC — Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Paull EO — Irving Cancer Research Center, Room 913,1130 St. Nicholas Avenue, New York, NY 10032, USA.
Sivakumar IKA — Department of Computer Science, Institute for Computational Medicine; Johns Hopkins University, Baltimore, MD 21218, USA.
Gentles AJ — Departments of Medicine and Biomedical Data Science, Stanford University, Stanford, CA 94305, USA.
Malhotra R — Seven Bridges Genomics, Cambridge, MA 02142, USA.
Farshidfar F — Department of Oncology, University of Calgary, Calgary, AB T2N 4N1, Canada.
Colaprico A — Universite libre de Bruxelles (ULB), Computer Science Department, Faculty of Sciences, Boulevard du Triomphe - CP212, 1050 Bruxelles, Belgium.
Parker JS — Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA.
Mose LE — Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA.
Vo NS — Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Liu J — Chan Soon-Shiong Institute of Molecular Medicine at Windber, Windber, PA 15963, USA.
Liu Y — Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Rader J — Medical College of Wisconsin, 9200 Wisconsin Avenue, Milwaukee, WI 53226 USA.
Dhankani V — Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA.
Reynolds SM — Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA.
Bowlby R — Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC V5Z 4S6, Canada.
Califano A — Irving Cancer Research Center, Room 913,1130 St. Nicholas Avenue, New York, NY 10032, USA.
Cherniack AD — The Eli and Edythe L. Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, MA 02142, USA.
Anastassiou D — Department of Systems Biology and Department of Electrical Engineering, Columbia University, New York, NY 10027, USA.
Bedognetti D — Division of Translational Medicine, Research Branch, Sidra Medical and Research Center, PO Box 26999, Doha, Qatar.
Mokrab Y — Division of Translational Medicine, Research Branch, Sidra Medical and Research Center, PO Box 26999, Doha, Qatar.
Newman AM — Institute for Stem Cell Biology and Regenerative Medicine and Department of Biomedical Data Science, Stanford University, Stanford, CA 94305, USA.
Rao A — Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Chen K — Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Krasnitz A — Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.
Hu H — Chan Soon-Shiong Institute of Molecular Medicine at Windber, Windber, PA 15963, USA.
Malta TM — Department of Neurosurgery, Henry Ford Hospital, Detroit, MI 48202, USA; Department of Genetics, Ribeirao Preto Medical School, University of São Paulo, São Paulo, Brazil.
Noushmehr H — Department of Neurosurgery, Henry Ford Hospital, Detroit, MI 48202, USA; Department of Genetics, Ribeirao Preto Medical School, University of São Paulo, São Paulo, Brazil.
Pedamallu CS — Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Bullman S — Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Ojesina AI — University of Alabama at Birmingham, Birmingham, AL 35294, USA.
Lamb A — Sage Bionetworks, 2901 Third Ave, Suite 330, Seattle, WA 98121, USA.
Zhou W — Center for Epigenetics, Van Andel Research Institute, Grand Rapids, MI 49503, USA.
Shen H — Center for Epigenetics, Van Andel Research Institute, Grand Rapids, MI 49503, USA.
Choueiri TK — Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Weinstein JN — Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Guinney J — Sage Bionetworks, 2901 Third Ave, Suite 330, Seattle, WA 98121, USA.
Saltz J — Department of Biomedical Informatics, Stony Brook Medicine, 100 Nicolls Rd, Stony Brook, NY 11794, USA.
Holt RA — Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC V5Z 4S6, Canada.
Rabkin CS — Division of Cancer Epidemiology and Genetics, National Cancer Institute, 9609 Medical Center Dr., Bethesda, MD 20892, USA.
Lazar AJ — Departments of Pathology, Genomics Medicine and Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Blvd-Unit 85, Houston, TX 77030, USA.
Serody JS — Department of Medicine and Microbiology and Lineberger Comprehensive Cancer Center, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA.
Demicco EG — Mount Sinai Hospital, Department of Pathology and Laboratory Medicine, 600 University Ave., Toronto, ON M5G 1X5, Canada.
Disis ML — UW Medicine Cancer Vaccine Institute, 850 Republican Street, Brotman Building, 2nd Floor, Room 221, Box 358050, University of Washington, Seattle, WA 98109-4714, USA.
Vincent BG — Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA. Electronic address: benjamin.vincent@unchealth.unc.edu.
Shmulevich I — Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA. Electronic address: ilya.shmulevich@systemsbiology.org.