Nature · 2020

Expanded encyclopaedias of DNA elements in the human and mouse genomes

ENCODE Project Consortium, Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, He Y, Mackiewicz M, Pauli-Behn F, Williams BA, Mortazavi A, Keller CA, Zhang XO, Elhajjajy SI, Huey J, Dickel DE, Snetkova V, Wei X, Wang X, Rivera-Mulia JC, Rozowsky J, Zhang J, Chhetri SB, Zhang J, Victorsen A, White KP, Visel A, Yeo GW, Burge CB, Lécuyer E, Gilbert DM, Dekker J, Rinn J, Mendenhall EM, Ecker JR, Kellis M, Klein RJ, Noble WS, Kundaje A, Guigó R, Farnham PJ, Cherry JM, Myers RM, Ren B, Graveley BR, Gerstein MB, Pennacchio LA, Snyder MP, Bernstein BE, Wold B, Hardison RC, Gingeras TR, Stamatoyannopoulos JA, Weng Z.

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Moore JE — University of Massachusetts Medical School, Program in Bioinformatics and Integrative Biology, Worcester, MA, USA.
Purcaro MJ — University of Massachusetts Medical School, Program in Bioinformatics and Integrative Biology, Worcester, MA, USA.
Pratt HE — University of Massachusetts Medical School, Program in Bioinformatics and Integrative Biology, Worcester, MA, USA.
Epstein CB — The Broad Institute of Harvard and MIT, Cambridge, MA, USA.
Shoresh N — The Broad Institute of Harvard and MIT, Cambridge, MA, USA.
Adrian J — Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA.
Kawli T — Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA.
Davis CA — Cold Spring Harbor Laboratory, Functional Genomics, Cold Spring Harbor, NY, USA.
Dobin A — Cold Spring Harbor Laboratory, Functional Genomics, Cold Spring Harbor, NY, USA.
Kaul R — Altius Institute for Biomedical Sciences, Seattle, WA, USA.
Halow J — Altius Institute for Biomedical Sciences, Seattle, WA, USA.
Van Nostrand EL — Department of Cellular and Molecular Medicine, Institute for Genomic Medicine, Stem Cell Program, Sanford Consortium for Regenerative Medicine, University of California, San Diego, La Jolla, CA, USA.
Freese P — Program in Computational and Systems Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Gorkin DU — Center for Epigenomics, Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA, USA.
Shen Y — Ludwig Institute for Cancer Research, University of California, San Diego, La Jolla, CA, USA.
He Y — Genomics Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Mackiewicz M — HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
Pauli-Behn F — HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
Williams BA — Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.
Mortazavi A — Department of Developmental and Cell Biology, University of California Irvine, Irvine, CA, USA.
Keller CA — Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA.
Zhang XO — University of Massachusetts Medical School, Program in Bioinformatics and Integrative Biology, Worcester, MA, USA.
Elhajjajy SI — University of Massachusetts Medical School, Program in Bioinformatics and Integrative Biology, Worcester, MA, USA.
Huey J — University of Massachusetts Medical School, Program in Bioinformatics and Integrative Biology, Worcester, MA, USA.
Dickel DE — Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Snetkova V — Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Wei X — Department of Genetics and Genome Sciences, Institute for Systems Genomics, UConn Health, Farmington, CT, USA.
Wang X — Département de Biochimie et Médecine Moléculaire, Université de Montréal, Montréal, Quebec, Canada.
Rivera-Mulia JC — Department of Biological Science, Florida State University, Tallahassee, FL, USA.
Rozowsky J — Yale University, New Haven, CT, USA.
Zhang J — Yale University, New Haven, CT, USA.
Chhetri SB — HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
Zhang J — Department of Genetics, School of Medicine, Yale University, New Haven, CT, USA.
Victorsen A — Department of Human Genetics, Institute for Genomics and Systems Biology, The University of Chicago, Chicago, IL, USA.
White KP — Tempus Labs, Chicago, IL, USA.
Visel A — Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Yeo GW — Department of Cellular and Molecular Medicine, Institute for Genomic Medicine, Stem Cell Program, Sanford Consortium for Regenerative Medicine, University of California, San Diego, La Jolla, CA, USA.
Burge CB — Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Lécuyer E — Département de Biochimie et Médecine Moléculaire, Université de Montréal, Montréal, Quebec, Canada.
Gilbert DM — Department of Biological Science, Florida State University, Tallahassee, FL, USA.
Dekker J — HHMI and Program in Systems Biology, University of Massachusetts Medical School, Worcester, MA, USA.
Rinn J — University of Colorado Boulder, Boulder, CO, USA.
Mendenhall EM — HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
Ecker JR — Genomics Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Kellis M — The Broad Institute of Harvard and MIT, Cambridge, MA, USA.
Klein RJ — Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Noble WS — Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Kundaje A — Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA.
Guigó R — Bioinformatics and Genomics Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology and Universitat Pompeu Fabra, Barcelona, Spain.
Farnham PJ — Department of Biochemistry and Molecular Medicine, Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Cherry JM — Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA. cherry@stanford.edu.
Myers RM — HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA. rmyers@hudsonalpha.org.
Ren B — Center for Epigenomics, Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA, USA. biren@ucsd.edu.
Graveley BR — Department of Genetics and Genome Sciences, Institute for Systems Genomics, UConn Health, Farmington, CT, USA. graveley@uchc.edu.
Gerstein MB — Yale University, New Haven, CT, USA. mark@gersteinlab.org.
Pennacchio LA — Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. lapennacchio@lbl.gov.
Snyder MP — Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA. mpsnyder@stanford.edu.
Bernstein BE — Broad Institute and Department of Pathology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA. Bernstein.Bradley@mgh.harvard.edu.
Wold B — Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA. woldb@caltech.edu.
Hardison RC — Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA. rch8@psu.edu.
Gingeras TR — Cold Spring Harbor Laboratory, Functional Genomics, Cold Spring Harbor, NY, USA. gingeras@cshl.edu.
Stamatoyannopoulos JA — Altius Institute for Biomedical Sciences, Seattle, WA, USA. jstam@altius.org.
Weng Z — University of Massachusetts Medical School, Program in Bioinformatics and Integrative Biology, Worcester, MA, USA. zhiping.weng@umassmed.edu.